This course is offered in English.
本課程採英文授課.

Parts of the contents require basic knowledge in Biochemistry.
部分內容需具有生科系本科生大二生化基礎

一、課程說明(Course Description)

In this course, we will introduce essential servers, databases and online
tools in Bioinformatics. We will also conduct hand-on exercises in
functional genomics and protein analyses.

本課程兼重學理與實作,藉由習題與範例,使學員能熟悉網路上各種生物資訊之取得及工具應
用,並針對各種常用生物資料庫作概略性的介紹,包括 NCBI, Protein Data Bank (PDB)、
KEGG、ExPasy 等生物資料庫。 課程中將連線上網,實際操作、演練各種輔助軟體
(Browser, viewer, molecular displayer...)。


二、參考書籍(References)

1. Bioinformatics: a practical guide to the analysis of genes and proteins
Third Edition -- Gene Module

三、教學方式(Teaching Method)

Lectures and hand-on training will be offered in Life Science computer room.

在電腦教室上課,課堂講解示範與學生實地操做並行。

四、暫定教學進度(Tentative Syllabus)
1. Introduction to Bioinformatics:
2. Information retrieval from biological database
3. DNA Database - GeneBank
4. DNA Sequence Analysis
5. Protein Sequence Database - SwissProt
6. Protein Sequence Analysis
7. Protein Structure Database - PDB
8. Protein Structure Analysis
9. Protein Structure Comparison
10. Protein Structure Modelling
11. Protein Docking
12. Structure based Drug Design


五、成績考核(Evaluation)

Grading policy - Homework 50% / Midterm and final Exam. 30% / Projects 20%

10% credit will be deducted for late homework. Homework submission shall be
be delayed for more than 3 days.


Do not be late for the class. Two counts of late arrival will be marked as 1
absence (10% credit deduction for the final score.) Three absences will
result in a "F" of the final grade.

上課時間 — 請勿遲到
遲到兩次以曠課一次論,曠課一次扣總成績十分,曠課三次以不及格論。


六、可連結之網頁位址 (links)

NTHU E-Learning System: http://lms.nthu.edu.tw/

NTHU LS Alpha server: http://alpha.life.nthu.edu.tw/