Course Desc<x>ription
<br>To understand the foundation of modern Digital microscopy.
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<br>Text Books
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<br>References:
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<br>Teaching Methods
<br>2 hours introduction, 1 hour group discussion
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<br>Syllabus
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<br>(Might change due to the teaching progress)
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<br>1. Bioimaging systems for biological sample
<br>2. Foundation of optical imaging and microscopy
<br>3. Different types of optical microscopy
<br>4. How to build an automated microscopy system-hardware and software
<br>5. How to build an automated microscopy system-hardware and software
<br>6. How to build an automated microscopy system-hardware and software
<br>7 Super-resolution microscopy
<br>8. Electron microscopy
<br>9 Sample for optical microscopy-Flouresent proteins and immunostaining
<br>10. Sample for optical microscopy-Tissue clearing and expansion microscopy
<br>11. Midterm
<br>12. Experiment (sample preparation)
<br>13. Experiment (imaging sample with confocal microscopy)
<br>14. Digital image properties
<br>15. Image viewing and processing with ImageJ
<br>16. Image segmentation and quantitative analysis
<br>17. Deep learning ba<x>sed automated image segmentation.
<br>18. Final.
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<br>Evaluation
<br>Experiment report: 30%
<br>Midterm: 35%
<br>Final: 35%
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