Course Desc<x>ription
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<br>To understand the foundation of modern Digital microscopy.
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<br>Evaulation
<br>Midterm: 35%
<br>Microscopy project: 35%
<br>Image analysis project: 30%
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<br>Syllabus
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<br>(This might change due to the teaching progress)
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<br>1. Bioimaging systems for biological sample
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<br>2. Foundation of optical imaging and microscopy
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<br>3. Different types of optical microscopy
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<br>4. How to build an automated microscopy system-hardware and software
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<br>5. How to build an automated microscopy system-hardware and software
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<br>6 Super-resolution microscopy
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<br>7. Electron microscopy
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<br>8 Sample for optical microscopy-Fluorescent proteins and immunostaining
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<br>9. Sample for optical microscopy-Tissue clearing and expansion microscopy
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<br>10. Midterm
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<br>11. Experiment (sample preparation)
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<br>12. Experiment (imaging sample with confocal microscopy)
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<br>13. Digital image properties
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<br>14. Image viewing and processing with ImageJ
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<br>15. Image segmentation and quantitative analysis
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<br>16. Deep learning ba<x>sed automated image segmentation.
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<br>Evaluation
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<br>Experiment report: 30%
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<br>Midterm: 35%
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<br>Final: 35%
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